Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTVILAEKETQAAAYAESLGPASKKGKVHIIKHTPYFSDEVHVIAAEGHLFEYGLPKDNWDLDKLPLVDVSFKQTLKQDKVSKEIFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHIPEGKNKVTKRLWVNSLTTRALQKAFQNLREPIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQKRGRLPKGKGNSLSVGRVQTPGVRLICENDLAIQNFRPETYWKLQLQDKETEISFS----NKEKYSDSELILAQARQLKAISIVSSVEMEEKQRAAPHLFNLSDIQGLAAKQWGFEPTKTERLIESLYLK--------KYLSYPRTDTRFITEEEFDYLKNYLKSYQEV-INCSFEAVNLEPRENYVNPEKVAKTSHYALIPTENIPNL----VTLKPDERLIYEAVVRRTLLMFAADCRYSTTTVEVENQGLVFKTTGRQM--FDPGWAAFSQQKLKGDIELPDYRVGDQIET-KVIIVEGMTKPPKRITESQLISDILPKYGLGTQATRATMLQTIQDRGYITKDKKTGQLFPTNKAYLLIHYLYDN--EFASPETTGGWELFLSQIGEGEINPREFVDAIKEKLAAQIAVVKERSD |
| 2GAI Chain:A ((7-547)) | --KYIVVESPAKAKTIKSILGNE-----------------YE-VFASMGHIIDLPKSK--FGVDLEKDFEPEF--AVIKGKE--KVVEKLKDLAKK-GELLIASDMDREGEAIAWHIARVTNT--LGRKNRIVFSEITPRVIREAVKNPR--EIDMKKVRAQLARRILDRIVGYSLSPVLWRNF----------KSNLSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDGLTAEIDVKEKKFFDAETLKEIQS---IDE--LVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEVFGEEY----VG------------------AHEAIRPTNVFMTPEEAGKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERN--TGEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEME-RLGIGRPSTYASTIKLLLNRGYIKKIRG--YLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143430 for 4077 contacts (-35.2/contact) +
2D Compatibility (PS) -53351 + (NN) -7570 + (LL) 2832
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -228419.0 ( -56.03 by residue)
QMean score : 0.396
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