Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIKQTQIKSSEKRSLGRKQDKKKGNQEYFDLHSCVELLDVKAIIDNRQAYIQLVDYGYLQLMEI-PGKDLGSLSYNEIRRTIDNFEKWLTDFNTDIQIETTTLPTNTDTQIMDLRHHLSLVRQEMAKLLPDSRRYMQLHDRE-L-LLR-NDIQVEESIQQEIYNTEFILWL-FAPTTTELDELV-RKAKSYGNND----FVPQEIT--KVKKEQIIKQFNNMNEKV |
| 3GYK Chain:A ((2-175)) | --------NANRDSLFNDPNAPVLGNP------------------EGDVTVVEFFDYNCPYCRRAMA----------EVQGLVDA--------DPNVRLVYREWP---------ILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVVEDALVPGFVEQSQLQDAVDRARKAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16304 for 1212 contacts (13.5/contact) +
2D Compatibility (PS) -17489 + (NN) -4943 + (LL) 4144
1D Compatibility (HY) -400 + (ID) 1200
Total energy: -3584.0 ( -2.96 by residue)
QMean score : 0.298
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