Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELSKRRQRQLKAQGYDLAFLSRIQPQGNIDFKKDDRSWMSGDGHHTVLHFYEYPSEDLDRFWLSDLMLIPGTRSFLSLYRANNRELKQEIKDAIEEKSTRITGNSKIVDNQQELDEIKDLTQLDREITKKNIAMLGMYVRNYSSSSTKEALFKKVEDIKDKTSNFKSTILSGELDFEYHAPFIPAQYQIDLPNRRRGIPIRAHDLAGGYFFNHTKLEDQRGVYMGWTPTKGAVNFNFLERDERRTRSFMILSGNPKMGQRSFLLKHTDGLYAKGNYIRNFDANGTFLDQTRQQHGLILDLSGEANRINIFQVFPTVTNEEGTEIDKKKSYKLHIEKLKSIFKLLNSEVTGDDLTTLGDMLNDFYIEEGLWARNPKLNPEKLKATDLVNDDYPILSDFILFADDYKRSLMAQSKPDEIEIKSVNRIYKTFNELLTTNAEMFEGTTEFQDISSEQVVTFDLSGLKGTPNLLNAQIFSVLSLVSADIVNNGKRSKQLLKANPHLTEMDMEHYIVNISEAQTLINPKYESSVELLADMIDTMGENFAGVVLSVNSLRGILFEAGAGNHKDPYVTAVQRIFGLMQYRVFAQTDET-TIPLLANALTGSMNQSELETLPRLAKGQLFMNIAGVGNLVFNQQLLAPEIKRYGGIQ |
| 2IUT Chain:A ((343-437)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDV--------------ITGLIKANIPTRIAFQVSSKIDSRTI---L--DQGGA--EQ--LLGHGDMLYLPPGTGLPIRVHGAFVSDDEVHRVVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60134 for 600 contacts (-100.2/contact) +
2D Compatibility (PS) -9952 + (NN) -2528 + (LL) 31888
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -43376.0 ( -72.29 by residue)
QMean score : 0.317
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