Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGE-TLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
1MGQ Chain:A ((15-51))
--------------------------------------------------------------------------------------------LDALGNSLNSPVIIKLKG----DREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVY
General information:
TITO was launched using:
RESULT:
Template:
1MGQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17728 for 164 contacts (-108.1/contact) +
2D Compatibility (PS) -3618 + (NN) 908 + (LL) 6468
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -16570.0 ( -101.04 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1MGQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MGQ-query.scw
PDB file :
Tito_Scwrl_1MGQ.pdb
: