Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEKEQKHFRVGISVSKKLGNAVVRNAIKRKIRHVLLSQKTALQDYDFVVIARKGVEELNYQALEKNLIHVLKIAGLI
3R3T Chain:A ((6-34))
---------------------------------------------------------------------------KYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAE
General information:
TITO was launched using:
RESULT:
Template:
3R3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5151 for 110 contacts (-46.8/contact) +
2D Compatibility (PS) -3279 + (NN) -2038 + (LL) 6516
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -7302.0 ( -66.38 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_3R3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R3T-query.scw
PDB file :
Tito_Scwrl_3R3T.pdb
: