Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQSDAYLSLNAKTRFRDRTGNYHFASDKEAVEQYMIEHVEPNTMAFTSLIE--KLDYLVSNNYYESDLLKQYNLEFICQIFEHAYAKKFAFLNFMGALKFYNAYALKTEDNRYYLEHYEDRVVMNALFLAAGDEKAAYDLVDDMLANRFQPATPTFLNAGKKRRGEYISCYLLRI-EDNMESISRAISTSLQLSKRGGGVALCLTNLREFGAPIKGIKNQATGIVPVMKLLEDSFSYANQLGQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIRIKSLSLGLVIPDITFELAKANKDMALFSPYDIERVYGKPMSDISITEEYETLLANADIRKTFISARKLFQTIAELHFESGYPYILFEDTVNAKNPHKKEGRIVMSNLCSEIAQVNTASQFSEDLTFTKVGHDVCCNLGSINIARAMD------QAADFEKLIANSIRALDRVSRTSDLDSAPSIKKGNAANHAVGLGAMNLHGFLATNHIYYDSQEAIDFTDCFFYAMAYYAFKASNHLAKEKGTFEGFSESSYADGSYFYQYTEQNFEPKTQRVKNLLAEYGLTLPSQEDWRKLVQSIKEIGLANAHLLAVAPTGSISYLSSCTPSLQPVVSPVEVRKEGALGRVYVPAYK-------------------------------IDADNYVYYKKGAYEVGPEAIINIAAAAQKHIDQAISLTLFMTDQATTRDLNKAYIQAFKQKCAS-IYYVRVRQDILEGSESYDDDMLDDFTSSDLEDCQACMI |
| 3K8T Chain:A ((90-746)) | ----------------------------TT--KQFSKV--------VEDLYRYVNAATGKPAPMISDDV-YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRIN--GQVAERPQHLIMRVALGIHGRDIEAALETYNLMSLKYFTHASPTLFNAG-TPKPQMSSCFLVAMKEDSIEGIYDTLKECALISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGG--PGAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS--DCYGDEFEALYTRYEKEG-R-GKTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNLGVIKSSNLCCEIVEYSAP------------DETAVCNLASVALPAFIEKTSTYNFK-KLHEIAKVVTRNLNRVIDRNYY-PVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKP------------------YGMWDWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMY----------QVVNPYLLRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYK-TVWEISQKTIINMAADRSVYIDQSHSLNLFLR-APTMGKLTSMHFYGWKKGLKTGMYYLRTQ------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -315733 for 5466 contacts (-57.8/contact) +
2D Compatibility (PS) -62880 + (NN) -20713 + (LL) 7180
1D Compatibility (HY) -29600 + (ID) 7500
Total energy: -429246.0 ( -78.53 by residue)
QMean score : 0.447
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