Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKTDTPDYKPSIYSLTRDELIAWAIEHGEKKFRASQIWDWLYKK--RVQSFD---EMTNISKDFIALLNENFVVNPLKQ-------RIVQESADGTVKYLFELPDGML----------IETVLMRQ-----YYGLSVCVTTQVGCNIGCTFCASGLIK--KQRDLNNGEITAQIMLVQKYFDERGQGERVSHIVVMGIGEPFDNY-TNVLKFLRTVNDDNGLAIGARHITVSTSGL-----AH-KIREFANEGVQVNLAVSLHAPNNELRSSIMRINRSFPLEKLFAAIEYYIETTNRRVTFEYIMLNGVNDTPENAQELADLTKKIRKLS-YVNLIPYNPVSEHDQYSRSPKERVEAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAKVGR |
| 2A5H Chain:A ((10-316)) | -------------------------------KDVSDADWNDWRWQVRNRIETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQAIPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNT-------PQVRDVLLSG-GDALLVSDETLEYIIAKL-REIP-HVEIVRIGSRTPVVLPQRITPELVNMLKKYH-PVWLNTHFNHPNEI-------------TEESTRACQLLAD-AGVPLGNQSVLLRGVNDCVHVMKELVNKLVK--IRVRPYYIYQCDLSLG-LEHFRTPVSKGIEIIEGLRGHTSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65356 for 2062 contacts (-31.7/contact) +
2D Compatibility (PS) -28903 + (NN) -11101 + (LL) 3688
1D Compatibility (HY) -6800 + (ID) 1850
Total energy: -110322.0 ( -53.50 by residue)
QMean score : 0.335
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