Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDF-----AVSAPEIVLAAGAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDL---ADYDDLFNEKMDMLLAINSATNLDWKGH-LTQTVNERPIYPRALQ-RQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAKGRPHW--SEM----TKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 3RAO Chain:A ((21-367)) | GVEYGFWLPIFGGWLR-NVNDESMPPTFEYAKQTAQAAEQLGFSTTLIAELNLNDIKGVSAPSLEAWTTAAALAAVTDRLEIMTAVR-PGFHNPAVTAKMAANIDQLSNGRFTLNVVSAWWEEEAKQYGGVFTAHDERYDRTEEFVTILKGLWKEEEFSYKGNFYEL--HHTHLSPKPVQKQGIKLYAGGE-SKRGKEVIVNHADAYVMHGG--TVEEVSVKIEDMKNRRKKVTEEPL-QSFGLAAYVICRHTEEEALEEWRRITDVK---------FVSKSQLEQQVKLNDYSVSNRGLRPNLIGTPEQIAERILAFEK-VGVTLLLLQFS-------PQLEEMKRFSEKVMPLVEAKRKEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172523 for 2656 contacts (-65.0/contact) +
2D Compatibility (PS) -33958 + (NN) -13329 + (LL) 704
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -228206.0 ( -85.92 by residue)
QMean score : 0.448
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