Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAPKLVPLLRKGDSVAVNGVCLTVL---DKSETA--FIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDAPPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
4G6I Chain:B ((1-197))
MFTGIITDIGKVDRVKPLNEGVLLRIETAYDPETIELGASIACSGVCLTVVALP----NARWFEVEAWEEALRLTTISSWQSGRKINLERSLKLGDEMGGHLVFGHVDGQAEIVERKDEGDAVRFTLRAPEELAPFIAQKGSVALDGTSLTVNGVNANEFDVLLIRHSLEVTTWGERKAGDKVNIEIDQLARYAARLAQYQ--------------------
General information:
TITO was launched using:
RESULT:
Template:
4G6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112774 for 1464 contacts (-77.0/contact) +
2D Compatibility (PS) -19388 + (NN) 4623 + (LL) 1060
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -143729.0 ( -98.18 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_4G6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G6I-query.scw
PDB file :
Tito_Scwrl_4G6I.pdb
: