Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNHKTKKL-------TVLAIMIAL-DV-FLTPIFRIEGMAFMSSVVNI-IAG----------------------VIMGPIYALVMALVTAFIR-----ILTQAGV---ASV----------------APLAILGAGPGAFLAG-----WLYQFYAKDWMSWVG-EFIGTGIIGALLSAP----IMVWFWTWTADGNHEVLAKASAAQSIFLFMPR--FIGATIIG---GVI-ALLLLQG-LKRVPVFMTIQALF-KGEKVK----- |
| 4RWR Chain:A ((55-323)) | VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKSKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYEGKPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQIFTVADFQKRLGVKVLADGKVGDIKGRTEGKRVKDVAFQGKTLTGRDVRDKLELRSSDFTWKQEGDKIVVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190156 for 1233 contacts (-154.2/contact) +
2D Compatibility (PS) -19744 + (NN) -2148 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 1850
Total energy: -212298.0 ( -172.18 by residue)
QMean score : 0.093
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