Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYLEQLKEVNPLTICITNNVVKNFTANGLLALGASPAMSECIEDLEDLLKVANALLINIGTLTKES-WQLYQEAIKIANKNQVPVVLDPVAAGASRFRLEVSLDLLKNYSISLLRGNGSEIAALVGEKQASKGADGGKVADLESIAVKANQVFDVPVVVTGETDAIAVRGEVRLLQNGSPLMPLVTGTGCLLGAVLAAFIGSSDRSDDLACLTEAMTVYNVSGEIAEKVAKGKGVGSFQVAFLDALSQMKSEMIMDK
3RSS Chain:A ((313-501))
-------------------------------------------ECLELSKDVDVVAIGPGLGNNEHVREFVNEF---LKTLEKPAVIDADAINVLDT--SV-LKER--KSPAVLTPHPGEMARLVKKTVG-----DV--KYNYELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNT-GLSKGGSGDVLTGMIAGFIAQGLS--PLEASTVSVYLHGFAAELFEQ----DERGLTASELLRLIPEAIRRLK---
General information:
TITO was launched using:
RESULT:
Template:
3RSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105304 for 1557 contacts (-67.6/contact) +
2D Compatibility (PS) -20466 + (NN) -10548 + (LL) 4700
1D Compatibility (HY) -1600 + (ID) 1750
Total energy: -134968.0 ( -86.68 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_3RSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RSS-query.scw
PDB file :
Tito_Scwrl_3RSS.pdb
: