Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVEHFVTKFVPENYNLFLDINRQTKTFSGNVAVSGEALDNNISFHQKGLTIKSVLLDNQPLDFQLDEDNEAMHIQLHETGSMVLVFEFSGHITDNMTGMYPSYYTVNGIKKEVISTQFESHFAREVFPSIDEPEAKATFDLSLKFDQKEGEIALSNMPEINAEQRQETGLWTFDTTPKMSSYLLAFALGELHGKTTHTKNGTLVGSYATKAHQLNELDFSLDIVVRVIEFYEDYFGVRYPIPQSLHVALPDFSAGAMENWGLVTYREVYLLVDENSSVSSRQQVALVVAHEIAHQWFGNLVTMKWWDDLWLNESFANMMEYVSIDYIEPKLNIFEDFQTGGLPLALKRDATDGVQSVHVEVNHPDEINTLFDPAIVYAKGSRLMHMLRRWLGDTDFAAGLKIYFEKHQYQNTIGRDLWNALSQTSGKDVAAFMDSWLEQPGYPVMAAKIEEDELILTQKQFFIGEHEDKSRLWQIPLNSNWEGIPEILTEETVVIPNFSQLAEKNKENGALRFNTENTAHYITNYQGQLLEHIISDLPLMDNISKLQIVQERHLLAESGMISYSSLIPLVSLLSQETSYLVNSAIKSVI-DGLSLFVQEDSQDEFDFKEFVNKLSAFNFNRLGFEKREGEGDDSEMVRHLSLSLALYSDNEHAIEEAHHIFKAHENNIAAIPAAIRLLVL-TNEMKHFESKELSHLLLETYSTTTDGNFKRQLASALSHTTDSKTLKKLLSDWKNKDIVKPQDLAMSWYATFLKNSFTQQSVWEWAQENWEWIKA----TLGGDMSFDKFVIYPSSSF-KTEERLEQYKNFFEPQLSDMAISRNISMGIKEISARVLLITKQKEEVINTIKKYI |
| 1Z5H Chain:A ((2-780)) | -----------EVEKYDLTLDFDIQKRTFNGTETITADA--GDIVLDAVGLQINWMKVNGRDTAFTYD--GQTVRAPG-DSQPQKIEISFAGKVSDSLSGIYYA-----GRENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVID-K-DYDAISNMPPKRIE-VSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEK-YRDIDLILASLKD---IRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFD-EISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG--EEEGRWPVPVNIKKKDGV-----ERILLEDEA---SIE-ADGLIKINADSAGFYRVLYDDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHA----FDDDARAFCRSRMQFL----TGKQ--DENLKIALGR--VSRLYV-MVDESYAEEMSKLFKDFD----SAEPEMRSSIATAYALVTG-D---LKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTVYGMVEKT-EIKKQDMI-SFFSSALETLPGRE----FIFANLDRIIRLVIRYFTGNRTASRTVEMMIPVIGLDHPDAEDIVRNIGS---KNI-SMGLAKGIEMLAVNRKLVERIRQTAVK------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -238006 for 6632 contacts (-35.9/contact) +
2D Compatibility (PS) -81327 + (NN) -18271 + (LL) 6952
1D Compatibility (HY) -44000 + (ID) 10300
Total energy: -384952.0 ( -58.04 by residue)
QMean score : 0.432
|
|
|