Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLFLIMMERAGLIILLAYAFVHIPFIKQTLKQPELKKHQYILLILFSLFAIISNFTGVEIQSDLSIIPQTLNHIADQSSVANTRVLTIGVSGLIGGPIVGIIVGLLSVFVRYLQGGLAPHIYVISSLLIGLCSGLSGNYLRKNYNKIRVLDAMVVGFGMEILQMICILIFSVDFNQALRLVSFISMPMILSNTLGLGIFISIISSTQKLEEHAKAFQTHQVLELANLTLPYLRKGLTTESCQPVAEIIHKHMDVSAVSLTSQSAILAYVGDGADHHLPNTQILTKLAKRAIDTGKVSVATDKSEIECDHKNCPLSSAIVIPLHIHDVIVGTLKLYFSDAQHMTYVDRQLAEGLGNIFSTQLALGQAEEATRLLQDAEMKSLQAQVNPHFLFNALNTIYGLIRMD-----------------------------SEKARKLVQDFSKVIRANLQRA-----KQNLIPLHDELEQVNAYLALEEARFP---NM---VAFNLDNQTNSDDNLMIPP----FTLQVLIENSYKHAFKHVNKNN-------QLKVTIARNNDRLHIIVQDNGIGIPKEKLITLGKKTQIS-------KQGSGTAIENLVRRLNIIYDGQASLKFESN-DSGTCAIVNIPIKN |
| 2E0A Chain:A ((102-350)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRML-MNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPD-QPIHIVYVPSHLHHMLFELFKNAMRAT----VEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPNAPLAGFGYGLPISRLYAKY-FQG--DLNLYSLSGYGTDAIIYLKALS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25066 for 1281 contacts (-19.6/contact) +
2D Compatibility (PS) -19512 + (NN) -6864 + (LL) 33092
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -23650.0 ( -18.46 by residue)
QMean score : 0.463
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