Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLH-K-AHDYEEVLEELKSWLIDK-SSSKE------PL-VQPTLSSFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKD--FNEFATFPTI--EEA----NHYQLTPEQKAKIKS--NRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 1Z69 Chain:A ((1-324)) | MKFGIEFVPSDP--------ALKIAYYAKLSEQQGFDHVWITDHYNN-----RDVYSTLTVLALNTNSIKIGPGVTNSYTRNPAITASSIASIAEISGGRAVLGLGPGD-KA-TFDAMGIAWKKPLATTKEAIQAIRDFISGKKVSMDGEMIKFAGAKLAFKA-GNIPIYMGAQGPKMLELAGEIADGVLINAS---HPK---DFEVAVEQIKKGAEKAGRDPSEVDVTAYACFSIDKDPVKAVNAAKVVVAFIVAGSPDLVLERHGIPVEAKSQIGAAIAKGDFGALMGGLVTPQMIEAFSICGTPDDCMKRIKDLEA-IGVTQIVAGSPIG--PAKEKAIKLIGKEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147556 for 2562 contacts (-57.6/contact) +
2D Compatibility (PS) -32709 + (NN) -15345 + (LL) 1036
1D Compatibility (HY) -2400 + (ID) 2400
Total energy: -199374.0 ( -77.82 by residue)
QMean score : 0.540
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