Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKK--LSKVFS-DEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFV-----------------------------------ISEDQKTNDLV---FIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKH--NGSFANYFSENLL-QVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFDDNLTARLT---FVDELKDAIPGPVQVSDI-DHSRQIKKLENQKLSLSNGIELIVPNNVY-QDAESVEFIQNPDGTYSILIKNIQDIQNK------------------- |
4MND Chain:A ((40-457)) | LMKAVILAAGLGGGVPKPLVRVGGCEIILRTMKLLSPHVSEFIIVASRY--ADDIDAFLKDKGFNYKIVRHDRPEKGNGYSLLVAKNHVEDRFILTMGD--HVYSQQFIEKAVRGEGVIADREPRFVDIGEATKIRVEDGRVAKIGKDLREFDCVDTGFFVLDDSIFEHAEKLRDREEIPLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRALVSAAVGDGFISRKINRKISTRISAAIVNKVNPNQMTLISFLVGAFSALASF--FSIPLAGLLYQFSSILDGCDGEIARASLKMSKKGGYVDSILDRFVDFLFLAIIALLYPKTATVAMFAIFGSVMVSYTSEKYKAEFGESIRVLNYIPGKRDERIFLIMIFCLLSAISLQWIFWMFLFVAAISLTRVVVTLLAVLVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57898 for 2281 contacts (25.4/contact) +
2D Compatibility (PS) -32849 + (NN) -183 + (LL) 600
1D Compatibility (HY) -13600 + (ID) 2650
Total energy: 9216.0 ( 4.04 by residue)
QMean score : 0.174
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