Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPKTEKGNSL--IVGYPQIGLSPFLFSHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK------------ |
4JIU Chain:A ((1-105)) | ------MVEDLLEHAKDILGYQRPVKVRI-RPLKMSIARVSFKYGTITLDPAVLNLEEEEMFYILIHELAHLKAETSYHSSSFWREVEKVFPGERAKEIEDRIMTKLQRNMV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2137 for 622 contacts (3.4/contact) +
2D Compatibility (PS) -9222 + (NN) -395 + (LL) 880
1D Compatibility (HY) -400 + (ID) 600
Total energy: -7600.0 ( -12.22 by residue)
QMean score : 0.202
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