Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MIDTFKVKWFK------------RGMSLLVL---ILVFF------LGLGFGQMGNSSQS-----KDRPKQTATKKTRTNTITQTQVKEFLV----AYYTKKDLEENRNRYKD---YMTEGLYNATISEENKAQNQAYRGFVVNFEFQDANIYIDQVHKQVICE--VTYTNDLLQKKNNKDGAQIGVVNHTTIQLAYTKLNGKYLINQMSTILLTDSANPSE-----ETESYGAIAPSNTKD----------------------------------------- |
| 3WO4 Chain:B ((1-301)) | GPESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIALHDCVLEFWPVELNDTGSYFFQMKNYTQKWKLNVIRRNKHSCFTERQVTSKIVEVKKFFQITCENSYY--QTLVNSTSLYKNCKKLLLENNKNPTIKKNAEFEDQGYYSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVELG---------KNVRLNCSALLNEEDVIYWMFGEENGSDPNIHEEKEMRIMTPEGKWHASKVLRIENIGESNLNVLYNCTVASTGGTDTKSFILVRKAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5799 for 940 contacts (6.2/contact) +
2D Compatibility (PS) -19639 + (NN) 6455 + (LL) 1068
1D Compatibility (HY) -6800 + (ID) 2300
Total energy: -15417.0 ( -16.40 by residue)
QMean score : 0.181
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