Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVPATSANIGPGFDSIGVALS-KYLSIEVLE-ESTEWLVEHNLVNIP-KDHTNLLIQTALHVKSD---LAPHRLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRLE------GHPDNVAPAIFGDLVISSIVKNDIKSLEVMF-PDSSFIAFIPNYELKTSDSRNVLPQKLSYEDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQPLVKEFGVIKQISTQNGAYATYLSGAGPTVMVLCSKEKEQPIVTELSKLCLDGQIQVLNIERKGVRVEKR |
| 1H72 Chain:C ((3-295)) | VRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEP-LEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKD-KVYGITISGSGPSIIAFPKEEFIDEVENILRDY--YENTIRTEVG-KGVEVV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136009 for 2557 contacts (-53.2/contact) +
2D Compatibility (PS) -30076 + (NN) -6233 + (LL) 344
1D Compatibility (HY) -12000 + (ID) 3900
Total energy: -187874.0 ( -73.47 by residue)
QMean score : 0.396
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