Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKGLKSLYTLLGLISLTLLGFVAVISKQHIYLPSFNWLDWDFNLPSPIDVGMYHYFFWGALVLFVIVLLAILVVLFYPRRYTEYKLADKTGKLMLKKSAIEGFVKTEVLKT--GLMKSL-SVTAHLYKKKVKVDVKGLLTSRTNVPEQLEHIQSDVELGLKEFFGLEKKMNTRVFVKQVEEENVGNAKTNKSRVE |
| 3BYP Chain:A ((14-87)) | -------------------------------------------------------------------------------------------------------RIRAFLQERIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAH-RLCDELERALAQAFPG--L-QATIHVEPEG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15455 for 435 contacts (-35.5/contact) +
2D Compatibility (PS) -7560 + (NN) 1169 + (LL) 9936
1D Compatibility (HY) -800 + (ID) 400
Total energy: -13110.0 ( -30.14 by residue)
QMean score : 0.455
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