Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKVQTGGKLYIAGEYAILYPGQVAILKNIPI-YMTALATFADNYSLYSDMFNYTASLQPDKQYSLIQETILLMEEWLINFGKNIKPIHLEITGKLERYGLKFGIGSSGSVVVLTIKAMAALYEIEMPSDLLFKLSAYVLLKRGDNGSMGDIACIAYEHLISYSAFDRRAVSKMIETKPLEQVLEAEWGYRITKIQASLEMDFLVGWTMQPSISKEMINIVKSTI--TQRFLDDTNYQVVQLLSAFKEGDKEAIKRCLEEISLLLFNLHPSIYTDKLQKLKEASKGLD-IVTKSSGSGGGDCGIAISFNKNDNQTLIKRWESAGIELLSKETLS |
| 2OI2 Chain:A ((5-288)) | VGVGQAHSKIILIGEHA-VVYGYPAISLPLLEVEVTCKVVPAESP-WRLY--E------EDTLSMAVYAS----LEY---LNITEACIRCEID----EK---RGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFIKNVG---FTELE--------------------MDLSAYLVIADTGVYGHTREAIQVVQNKGKDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIG--VSSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTWIESL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162415 for 2477 contacts (-65.6/contact) +
2D Compatibility (PS) -29501 + (NN) -13235 + (LL) 4624
1D Compatibility (HY) -1200 + (ID) 3050
Total energy: -204777.0 ( -82.67 by residue)
QMean score : 0.411
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