Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------METNIYGDYGRYLPLILE-----DFSQRIQLENDKAKVETGYKLYEHIIGRIKTSDS--MIEKCRRKQLPVTVDSALKAIRDSIGVRIICGFVNDIYQIVERIKSFDDCRIVVEKDYIQHVKPNGYRSYHVILEIDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE |
| 1QJB Chain:A ((1-232)) | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QJB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1342 for 1571 contacts (-0.9/contact) +
2D Compatibility (PS) -21498 + (NN) 1621 + (LL) 0
1D Compatibility (HY) 4000 + (ID) 1100
Total energy: -18319.0 ( -11.66 by residue)
QMean score : 0.189
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