Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGF-DVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSSIPQHKEDKVQLLFESYLLGMTNLSKDSSEFVSTIVMTH
1GH5 Chain:A ((1-87))
MINRT-DCNENSY---LEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSD-------------PRLETITLQK-WGSWNPGHIH-------EILSIRIY-
General information:
TITO was launched using:
RESULT:
Template:
1GH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40451 for 590 contacts (-68.6/contact) +
2D Compatibility (PS) -8581 + (NN) 5455 + (LL) 1544
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -46283.0 ( -78.45 by residue)
QMean score : 0.183
(partial model without unconserved sides chains):
PDB file :
Tito_1GH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GH5-query.scw
PDB file :
Tito_Scwrl_1GH5.pdb
: