Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTD---SKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQ-----Q--LKAA-NSYV-TGPLFLSVGDTLFGKSGED--AKGTNWGNEAGVSVLKWIADQKKNDGFVN-LTAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 2ZYO Chain:A ((13-390)) | -------------------------------KSEGKPDKLVVWENADDGVQLNNTKKWAGEFTKK-TGIQVEVVPVALLKQQEKLTLDGPAGKGADLVTWPHDRLGEAVTKGLLQPIQVDN--SVKNQFDDVAMKALTYGGKLYGLPKAIESVALIYNKKLMGQ-VPATYDELFQYAKANNKPDEQKYGVLFEANNFYYTYFLFAAKGAAVFKEQDGTLDPNEIGLNSPEAVQGMNEVQKWFTEARLPQSLKADTVNGLFKSGKVAAVINGPWAIKDYQAA-G-INVGVAPLPKIDG-KDA---QTFIGVKGWYLSAYSK-----YPKYATELMQFLTSKEALASRFKETGEIPPQKELLNDPMIKNNPVVNGFAKQA---SKGVPMPSIPEMGVVWEPINNAHTFVAQGKQTPEQALNDAVKIMKEKIQTM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30910 for 3072 contacts (-10.1/contact) +
2D Compatibility (PS) -38606 + (NN) -13410 + (LL) 2556
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -100220.0 ( -32.62 by residue)
QMean score : 0.390
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