Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYTNGNFEAFARPRKPEGVDKKSAYIVGSGLAGLAAAVFLIRDGQMDGQRIHIFEELPLSGGSLDGVKRPDIGFVTRGGREMENH----FECMWDMYRSIPSLEVPDASYL-------DEFYWLDKDDPNSSNCRLIHKQGNRLESDGD-FTLGTHSK-ELVKLVMETEESLGAKTIEEVFSKEFFE---SNF-WTYWATMF-AFEKWHSAIEM-RRYAM------RFI----HHIGGL-----------PDFTSLKFNKYNQYDSMVKPIISYLESHNVDVQFDSKVTNISVDFKNGQKLAKAIHLTVGGEAKTIDLTPDDFVFVTNGSITESTNYGSHDTVAKPNTDLGGSWNLWENLAAQSDEFGHPKVFYKDIPKESWFVSATATIKDPAIEPYIERLTHRDLHDGKVNTGGIVTVTDSNWMMSFAIHRQPHFKEQKENETIVWIYGLYSNVEGNYIKKPIEECTGREITEEWLYHLGVPEMKIHDLSDKQYVSTVPVYMPYITSYFMPRVKGDRPDVIPQGSVNLAFIGNFAESPSRDTVFTTEYSIRTAMEAVYTFLNIERGVPEVFNSAFDIRVLLQSLYYLNDKKSVEDMDLPIPALMRKVGMKKIRGTYLEELLREAHLL |
| 3NKS Chain:A ((2-295)) | ---------------------GRTVVVLGGGISGLAASYHLSRAP--CPPKVVLVESSERLGGWIRSVRG-PNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEV-LPVRGDHPAAQNRFLYV--GGAL---HA----LPTGLRG--PSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLG----QPDSALIRQALAERWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG---RW-KVSLR----DSSL---EADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTE----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75597 for 1663 contacts (-45.5/contact) +
2D Compatibility (PS) -26351 + (NN) -7006 + (LL) 7752
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -107552.0 ( -64.67 by residue)
QMean score : 0.195
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