Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVQKSFKSNTHYGTLYLVPTPIGNLDDMTFRAIRILREVDFICAEDTRNTGLLLKHFDITTKQISFHEHNAYDKISGLIDLLKEGRSLAQVSDAGMPSISDPGHDLVKAAIEGGIPVVSIPGASAGITALIASGLAP--Q----PHIFYGFLPRKKGQQITFFETKKDYPETQIFYESPFRVSDTLKHMKEI-YG-DRQVVLVRELTKLYEEYQRGTISQLLGHIEKVPLKGECLIIVDGKRDTERVKDSSQQDPLVLVKEYIANGDKTNQAIKKVAKELNLNRQELYASFHDL |
| 1CBF Chain:A ((15-249)) | -------VPRGSHMKLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKTAGMHLEEMVGTMLDRMREGKMVVRVH-TGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTDLAKHKCTIALFLSSTLTKKVMKEFINAGWSEDTPVVVVYKATWPDEKIVRTTVKDLDDAMRTNGIRKQAMILAGWALDP-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124626 for 1820 contacts (-68.5/contact) +
2D Compatibility (PS) -24920 + (NN) -12598 + (LL) 4288
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -165606.0 ( -90.99 by residue)
QMean score : 0.538
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