Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFNGKFHLFYQNWPFGAAHGLKQWVHTESDDLVHFKETGIKLKPDHV-ND-SHGAYSGSALAI---------DD--KLFLFYTGNVRDMK--------WNRDPRQIGAWMTSDGK-ITKFD--KVLISQ-PND---VTEHFRDPQIFNYD--NQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMIECPNIIFVK------GKPVLLYSPQGLDKNELDYQNIYPNTYKIGQYF-DANSSKIV----EPSPIYNLDYGFEAYATQGFNTS-DGRAFIVSWIGLPDIDYPSDQFDYQGAMSLVKELSIKN-G---NLYQYPVPAMKNLRQHQAEFK--T--Q------LQ-TNNTYELELLVPRN-DLSSFVLFA-NPK--GQGLSITIDTAKGKVIVDRSQAGQQYAT-EFGTSRQCNI--P-KDATSVNVFIDKSIFEIFINKGEKVFTGRVFPDAEQSGIQLKEG--H--V-HGKYFELKY |
| 1Y4W Chain:A ((2-514)) | --------------------------NYDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAE---LHKLAIYTS--DNLKDWKLVSEFGPY-NAQGGVWECPGLVKLPLDSGNSTKWVITSGLNPGGPP---GTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSAKSKASTFAIALRASANFTEQTLVGYDFAKQQIFLDRTHSGDVSFDETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSSDAVHARLASTGGTTEDVRADIYKIAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129683 for 3907 contacts (-33.2/contact) +
2D Compatibility (PS) -47454 + (NN) -7472 + (LL) 1832
1D Compatibility (HY) -20000 + (ID) 5050
Total energy: -207827.0 ( -53.19 by residue)
QMean score : 0.391
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