Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAI-PHKALLLSPQKYNQVVGPNNKHNAVSVKVALHNQAIFLLLQDGFEPEKIVIDAFTS-SKNYQNYLKNEKNQFKQTITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLL----KAYGISSLEHCAKLHFANTKKAQALLK |
1IO2 Chain:A ((1-208)) | --------------------------------------------------------------------------------MKIAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIGSR---E--GTLNEFEVENFAKALNSLKV---KPDVIYADAADVDEERFARELGERLN-FEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYG---EIGSGYPSDPRTRAFLENYYREHG--EFPPIVRKGWKTLKKIAEKVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74793 for 1685 contacts (-44.4/contact) +
2D Compatibility (PS) -21797 + (NN) -10680 + (LL) 5804
1D Compatibility (HY) -6000 + (ID) 2350
Total energy: -109816.0 ( -65.17 by residue)
QMean score : 0.517
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