Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKKRYSKNSHNLITLLGIVVLASLISDFWSEVIATLLIIGGGYCAYYVYDKKRLKRFTSNQRIEALKSDIKETDQDIRHLEILKKDNRSKEYIKLAHQILPQLDLIRNEANQLQKAIEPNIYKRITKKANTFSNEINEQLIKLHASPELEPISDQEDEMIRIAPELKPFYHNIQDDHFAILKKIEEAD-NKAELAAIHQANMKRFTDVLAGYIRIKQSPKNFNNAKERLEQALQAIKKFNLDLDETLRQLNESDMKDFDVSLRMMQDERNSK |
3F1I Chain:H ((31-79)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------TNDSAVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQD----KLAQIRDARGALSALREEHREKLRRAAEE---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 736 for 179 contacts (4.1/contact) +
2D Compatibility (PS) -5258 + (NN) -2511 + (LL) 16312
1D Compatibility (HY) -2400 + (ID) 200
Total energy: 6679.0 ( 37.31 by residue)
QMean score : 0.371
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