Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTWNELTVHVNREAEEAVSNLLIETGSQGVAISDSADYLGQEDRFGELYPEVEQSDMIAITAYYPDTLDIEAVKADLADRLANFEGFGLATGSVNLDSQELVEEDWADNWKKYYEPARITHDLTIVPSWTDYEAKAGEKIIKMDPGMAFGTGTHPTTKMSLFALEQVLRGGETVIDVGTGSGVLSIASSLLGAKDIYAYDLDDVAVRVAQENIDMNPGTENIHVAAGDLLKGVQ-QEVDVIVANILADILIHLTDDAYRLVKDEGYLIMSGIISEKWDMVRESAEKAGFFLETHMVQGEWNACVFKKTDDISGVIGG |
3CJT Chain:M ((52-254)) | ---------------------------------------------------------------------------------------------------EEVGDEDWLEAWRRDLKPA-LAPPFVVLAPWHTWEG--AEIPLVIEPGMAFGTGHAETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKAL-GVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116244 for 1735 contacts (-67.0/contact) +
2D Compatibility (PS) -22015 + (NN) -6221 + (LL) 6468
1D Compatibility (HY) -11600 + (ID) 3250
Total energy: -152862.0 ( -88.10 by residue)
QMean score : 0.529
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