Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIIYFADDEKNIRDLVVPFLEHDGFTVRAFETGDLLLEAYKNQKPDLVILDIMMPGTNGLDVMKSIRQYDNIPIIMLTARDSDVDFITAFNLGTDDYFTKPFSPIKLSLHVKALFKRLDEKAIKNDTQYQFLDLTLDTEKRIALLSNEEMPLTKTEFDFLLVLIEKPETAFSRETLLNRIWGFDDIESRAVDDTIKRLRKKFKQYHSQVSIKTVWGYGFKLIKEDK
2ZWM Chain:B ((2-119))
-DKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQL-----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95733 for 956 contacts (-100.1/contact) +
2D Compatibility (PS) -12892 + (NN) -10739 + (LL) 8908
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -123256.0 ( -128.93 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_2ZWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZWM-query.scw
PDB file :
Tito_Scwrl_2ZWM.pdb
: