Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSDAFADVAKMKKIKEDIKSHEGQMVELTLENGRKREKNKIGRLIEVYPSLFIVEYKDTAAVPGAIDNTYVESYTYSDILTEKTLIRYFDDESAE
3FB9 Chain:A ((0-88))
GMSDAFTDVAKMKKIKEEIKAHEGQVVEMTLENGRKRQKNRLGKLIEVYPSLFIVEFGDVEGDKQ--VNVYVESFTYSDILTEKNLIHYLD-----
General information:
TITO was launched using:
RESULT:
Template:
3FB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 20909 for 534 contacts (39.2/contact) +
2D Compatibility (PS) -9065 + (NN) -1109 + (LL) 416
1D Compatibility (HY) 4400 + (ID) 100
Total energy: 15451.0 ( 28.93 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_3FB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FB9-query.scw
PDB file :
Tito_Scwrl_3FB9.pdb
: