Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MFYTIEELVE--QANSQHKGNIAELMIQTEIEMTGRSREEIRYIMSRNLEVMKASVI-----------------DGLTPSKSISGLTGGDAVKMDQYLQSGKTISDTTILAAVRNAMAVNELNAKMGLVCATPTAGSAGCLPAVISTAIEKLNLTEEEQLDFLFTAGAFG---------------------------LVIGNNASISGAEGGCQAEVGSASAMAAAALVMAAGGTPFQASQAIAFV----------IKNMLGLICDPVAGLVEVPCVKRNALGSSFALVAADMALAGIESQI--PVDEVIDAMYQVGSSLPTAFRE----------------------TAEGGLAATPTGRRYSKEIFGE |
| 1GA1 Chain:A ((3-372)) | GTAKGHNPTEFPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTGSSNGDYSDDQQGQGEWDLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAK---VINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAASFYSAISSTPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSNGFGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95622 for 2548 contacts (-37.5/contact) +
2D Compatibility (PS) -29319 + (NN) -395 + (LL) 416
1D Compatibility (HY) 6400 + (ID) 2200
Total energy: -120720.0 ( -47.38 by residue)
QMean score : 0.103
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