Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNN---KTVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEADIEDNFYSSDLALKSLFYNNKTLRLPKYGTASLVESENSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAF-NRMAFEPRHKVLAFDYT-QTY-ENITRSQVEDKDVNQSIMQLAYHLPITYKDEDYFALIVFNGLFGAF---------AHSLLFTEIREKQGLAYTIGSQFD--SFTGLFTIYAGIDKENRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLASDNPKVIVDHIYHEHY-LDQFHTSALFIDKVDDVTKSDIVSVATKLKLQA--FYFLEGN |
| 1PP9 Chain:A ((17-426)) | SQLDNGLRVASEQSS-QPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRP-GNALEKEVESM-GAHLNAYSTRE----HTAYYIKALSK--------DLPKAVELLADIVQNC-----SLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAHVAIAVEGPG-WAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLAS-IAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLC-TSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191599 for 3213 contacts (-59.6/contact) +
2D Compatibility (PS) -41450 + (NN) -11480 + (LL) 2172
1D Compatibility (HY) -5200 + (ID) 2500
Total energy: -250057.0 ( -77.83 by residue)
QMean score : 0.426
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