Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MPWSMKDYPASLKNLEKPVRK---KAIDIANAMIDEGYEEGRAIPIATSKAKEWAENASTDEIDDFLTHDDETERDADPSSG--SGPELMNKAEHVIKHKKGWAVKAEGAKRV-------------SEIKDTKKEAIERAKEIAA---HKGTEVIVHLADGSVQRKIKTGS-------------------------
4U6N Chain:A ((8-200))NVQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNG----TSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFP


General information:
TITO was launched using:
RESULT:

Template: 4U6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 435 -15017 -34.52 -102.85
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -34.52
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_4U6N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U6N-query.scw
PDB file : Tito_Scwrl_4U6N.pdb: