Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTLALAATAAVLMLSACSSGFGGEKEEEITQKTAKSSEKAIVPKYNISDSYYKMVLPFKAGKARGLTTEQLNTRLDIDEFETGLMRLAQDSFSTDDYLFQEGQYLDEDTVLSWLARKKTGSDLKKAEKEDKNFKNEGLNPALPSSGSTEEKNESSPIYLASMLEHDYLVRKDKNSIQLGGVMIGLALNSVYYYREKTGDPQKEVEIKDSTLRQQGEKIAQEVINRLRKKDNLKNVPITVALYKQASKTSIVPGNFIAKTEVKAGSTDISNWDDINEKYVFYPADTTTAEKYPDDTEVFKRFKNSIEEYFP-NYTGVVGTALYENDEMKKMKIDIPMQFYGKSEVVAFTQFLTGEVMDYYSKSSVDVEVNITSSDGQEAVIIRNAGDKEPTVHIYD
3N2Q Chain:A ((56-340))---------------------------------------------------------APLKEQKVINTANIKTNSKLDLAEYENGLINIATQQFDTESHVLQLNQYIPEKLIDELVAKVE------------------------------------AP-VLTNIIEQDYFGK---NELSLSGVMIGLAMSS---------------SVSNEEAMSKGTEVAKQLIEAINKNDKYNKSPITFAIFKQESTSSLKNGTYIASATVQKNDTNLGNWSTIDEKSYSYPSDEFT-QAHGEDNTKINNFAKEIKGF-NGDFIPVNAKVSYKKDQMDTLNMNIVIKYNGKTELMALTQLAAQGMLDKLP-KDAKVQLQIKSESKIEAVIIKEKNSDKPFVSFL-


General information:
TITO was launched using:
RESULT:

Template: 3N2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1392 -95420 -68.55 -340.78
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -68.55
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_3N2Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N2Q-query.scw
PDB file : Tito_Scwrl_3N2Q.pdb: