Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIYHMKVRTITGKDMTLQPFAGKVLMIVNTASKCGFT-SQLKQLQELYDTYQQEGLEILGFPCNQFMNQEPGEEADIQEFCETNYGVTFPMFSKVDVNGKNAHPLFVYLTEHAKGMLGTKAIKWNFTKFIVDRNGEIVGRYSPNTNPKELEDDIVKLLEQ
2P5Q Chain:B ((11-168))-SVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDD-IQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE-


General information:
TITO was launched using:
RESULT:

Template: 2P5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 789 -11262 -14.27 -71.73
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -14.27
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_2P5Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2P5Q-query.scw
PDB file : Tito_Scwrl_2P5Q.pdb: