Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYIKAGKWLTVFLTFLGILLFIDLFPKEEHDQKTKSKQKPDYRAAYHFTTPDKWKNDPQKPIYFDGKYHYFYLYNRDYPKGNGTEWRHAVSEDLVHWTDEGVAIPKYTNPDGDIWTGSVVVDKENTAGFGKNALVAIVTQPSAKDKK-QEQYLWYSTDKGKSFKFYSGNPVMPNPGTDD--------------FRDPKVIWDDQDNKWVMVMAEGSKIGFYESDNLKDWHYTSGF-FPEQA-GMVECPDLYMMRASDGTNKWVLGASANGKPWGKPNTYAYWTGSFDGKEFKADQTEAQWLDYGFDWYGGVTFEDSKSTDPLEKRYALAWMNNWDY-ANNTPT-MKNGFNGTDSVIRELRLKEQDGT-YSLVSQPIEALEQLTVSTDEIEDQDVNGSKTLSITGDTYQLDTDLSWSELKNAGVRLRESEDQKRHIDVGIFAEGGYAYVNRAATNQPDKS-NTYVESKAPYDVNKRKVHLKILVDKTTIEVFVGDGKTVFSNEVFPKPEDKGITLYSDGGTASFKNITVKHFDSIHE
4FFI Chain:D ((2-478))--------------------------------------------AVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHS-DQNNGPG-GWDHASTTDGVAFTHHGTVMP--LRPDFPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALP-DPVIVN--TDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRLRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADDGTRHWVLAASMDAYGIGLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDA--PETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSAVLPWNGRAYEIELDIAWDTATNVGISVGRSPDGTRHTNIGKY--GADLYVDRGPSDLAGYSLAPYSRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFAEGDTGISLYTDGGPAHFTGIVVREI-----


General information:
TITO was launched using:
RESULT:

Template: 4FFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2687 57099 21.25 125.22
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : 21.25
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_4FFI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FFI-query.scw
PDB file : Tito_Scwrl_4FFI.pdb: