Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNEILWGIAPIGWRNDDMPEIGAGNTLQHLLSDIVVARFQGTEVGG----FFPEPAI--------LNKELKLRNLRIAG----------------KWFSSFILRDGLG---------EAAKTFTLHCEYLQQVNADVAVVSEQTYSVQSLEKNV-FTEKPHF-TDDEWERLCEGLNHLGEIAAQHGLKLVYHHHLGTGVQTAEEVDRLMAGT-DPAHVHLLYDTGHAYISDGDYMGMLEKHIGRIKHVHFKDARLN--VMEQCRLEGQSFRQSFLKGMFTVPGDGCIDFREVYQ-LLLKHSYSGWIVIEAEQDPDVA-NPLEYALIARNYIDQQLLDLA
2ZDS Chain:A ((1-321))----PRNFTLFTGQWAD---------LPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGS---AIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLR-SIDYQGPVSVEWE---DAGMDRLQGAPEALTRLKAFDFEPP


General information:
TITO was launched using:
RESULT:

Template: 2ZDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1394 -10847 -7.78 -39.16
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -7.78
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_2ZDS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZDS-query.scw
PDB file : Tito_Scwrl_2ZDS.pdb: