Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTRFIRRQLILFA------IV--------SVVAIVVLGWYYLRIPS-------LVGIGQYTLKADLPASGGLYPTANVTYRGIT------IGKVTAVEPTDQGARVTMSIASNYK---IP---------VDASANV---HSVSAVGEQYIDLVSTGAPG---KYFSSGQTITKGTVPSEIGPALDNSNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDV-NDIIENSGPILDSQVNTG-DQIERWARKLNNLAAQTATRDQN-----VRSILSQAAPTADEVNAVFSGVRDSLPQTLANLEVVFDMLKRYHAGVEQLLV--FLPQGAAIAQTVLTPT---PGAAQLPLAPAINYP--PPCLTGFLPASE-----WRSPADTSPR--PLPSGTY------CKIPQDAQLQVRGARNIPCVDVLGKRAATPKECRSKDPYVPLGTNPWFGDPNQILTCPAPGARCDQPVKPGLVIPAPSINTGLNPAPADQVQGTPPPVSDPLQRPGSGTVQCNGQQPNPCVYTPTSGPSAVYSPASGELVGPDGVKYAVANSSTTGDDGWKEMLAPAS---------------------------------------------------------------------- |
| 5F9H Chain:A ((11-692)) | FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN-TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQPKPVP-------DKENKKLLCRKCKALACYTADVRVI---EECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 5F9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78000 for 3521 contacts (-22.2/contact) +
2D Compatibility (PS) -51779 + (NN) 4475 + (LL) -20
1D Compatibility (HY) -19600 + (ID) 3550
Total energy: -148474.0 ( -42.17 by residue)
QMean score : 0.121
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