Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAYLGDLAAIIGKSGGLDSRLLAATARGVNHYLGVQPG--SGIKTLEDLKGKRVGIF-RGTASQLSFDNALASVGLSEKDLKVINLD-FSAALSALAARQIDATWGLAG-LFALRDRGLAEIPLSTRDL------NGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREEN-RDAYIELVSKQAS-YPVVILQSEYRGRKLGDALSPRLDADFLGRLDASIQAAKRF--GLIRREFSAEQWAAPELLEAAGKLAKAKAVAQAAE |
| 3QSL Chain:A ((29-344)) | -----------------------------KLEKAKVQIAVGGKPLI--YY--LPLTIAEVKGFFK----DEGLDVSIADFA-GGSKALQAVVGGSADVVSGAFEHTLSLQAKGQFYRAFALQGRAPMIGVGVSKKNLPGYKGPADLKGRKIGVTAPGSSTNMVVNFFLAKHGLKASDVSFIGVGAGAGAVTALRSGQIDAISNTDPVVSMLETSGDIQIIVDTRTLKDTKEIFGGNMPAGCLYAPQAFVDANPNTAQALTNAIVRADKWIQ--KAGADEIAKAVPEGYLLGDPAVYKAAIGKSM--EGLS-PDGVIPEDGAATALKALAAFVPDFDAAKVDPAKAWTNEYTRRANEKYPN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132809 for 2761 contacts (-48.1/contact) +
2D Compatibility (PS) -32224 + (NN) -10236 + (LL) 3360
1D Compatibility (HY) -6400 + (ID) 3100
Total energy: -181409.0 ( -65.70 by residue)
QMean score : 0.476
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