Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQVLALKQALREHHILVFR-QQHLDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIVKVANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLDEATRREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRRVLFLSAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHARNAFPASERRRLKRISLAGSRPF |
| 1VZ4 Chain:D ((13-288)) | ---------------LELDVHPVAGRIGAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQSQEGFAKLLGEPVAHP----VV---------DGTRYLLQLDG----RANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAAAYQELPEPLRELADKLWAVHSNEY----------DYA----------YETEHPVVRVHPISGERALQL-GHFVKRIKGYSLADSQHLFAVLQGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRVTLAGEVPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134257 for 2032 contacts (-66.1/contact) +
2D Compatibility (PS) -26649 + (NN) -17109 + (LL) 1236
1D Compatibility (HY) -10800 + (ID) 4300
Total energy: -191879.0 ( -94.43 by residue)
QMean score : 0.473
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