Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAPLRIALIGAGNMGRQHYHRLQRIAGARLCAVADPQG---QAFAADTGVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKKPDSYFEVAWRREPGAGMLLTNLIHDLDLLRHLCGEVREVQALAGNAIR----GLPNEDNIALLLRFANGALGSLTGCDAAAAPWSWELAAGENPVYPRQAEQPCYLLAGTEGALSLPQLRRW---RYAEARQGWHDPLAASEEAVATGDPLQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVREAARSGRACAPASF |
| 3EUW Chain:A ((3-334)) | --LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGNLEQLVIISRDPAP---APKDYI-AGSGGIFRDMTIHDLDMARFFVPNIVEVTATGANVFSQEIAEFNDYDQVIVTLRGSKGELINIVNSRHCSYG-----------------YDQRLEAFGSKGMLAADNIRPTTVRKHNAESTEQADPIFNFFL-ERYDAAYKAELATFAQGIRDGQGFSPNFEDGVIALELANACLESAQTGRTVTLNPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174347 for 2682 contacts (-65.0/contact) +
2D Compatibility (PS) -33939 + (NN) -8717 + (LL) 1436
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: -228167.0 ( -85.07 by residue)
QMean score : 0.431
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