Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGRLRGTLAEKQPPHLILDVNGVGYEVEVPMTTLYRLPSVGEPVTLHTHLVVREDAHLLYGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSTLVKIPGVGKKTAERLLVELKDRFKAWENMPTIAPLVMEPRASATVSSAEADAVSALIALGFKPQEASRAVAAV--PGEDLSSEEMIRQALKGMV
2ZTD Chain:B ((17-206))
MIASVRGEVLEVALDHVVIEAAGVGYRVNATPATLATLRQ-GTEARLITAMIVREDSMTLYGFPDGETRDLFLTLLSVSGVGPRLAMAALAVHDAPALRQVLADGNVAALTRVPGIGKRGAERMVLELRDKV------------------------VRSPVVEALVGLGFAAKQAEEATDTVLAANHDATTSSALRSALSLLG
General information:
TITO was launched using:
RESULT:
Template:
2ZTD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121635 for 1256 contacts (-96.8/contact) +
2D Compatibility (PS) -19224 + (NN) -11914 + (LL) 1996
1D Compatibility (HY) -13200 + (ID) 3050
Total energy: -167027.0 ( -132.98 by residue)
QMean score : 0.732
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTD-query.scw
PDB file :
Tito_Scwrl_2ZTD.pdb
: