Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLQIRGYAAQSASTPLTAHR-----FERRAPRADDLVIDILYCGVCHSDLHQARNEWHN-SLYPLVPGHEIIGRVASVGEAVSGFAVGELVGVGCMVDSCRHCAACSEGLEQYCAEYPTLTYNGRD-RHDGLPTFGGYSERIVVSARFVLRIPQGLDPKAAAPLLCAGITSYSPL-RHWKVGP-GSRVAVVGLGGLGHMGLKFARALGAEVALFTRSPGKEEEARRLGA-DQVILSTDPQRMAAVAGRFDLILDTVPHQHDLN--PYLATLKRDGTLVLVGLLEPLEPAVHGAQLVMGRR--SIAGSAIGGIAETQEMLDFCAAHGIACDIEMIEIQQIN--QAYERMLASDVKYRFVIDMASLQKSF |
| 4OAQ Chain:B ((8-366)) | ---KFQGFAV---SDPKNWNRPKLASYERKQINPHDVVLKNEVCGLCYSDIHTLSAGWQPLQRDNLVVGHEIIGEVIAVGDEVTEFKVGDRVGIGAASSSCRSCQRCDSDNEQYCKQ-GAATYNSKDVRSNNYVTQGGYSSHSIADEKFVFAIPEDLPSSYGAPLMCAGITVFSPLIRNLGLDARGKNVGIIGIGGLGHLALQFANAMGANVTAFSRSSSKKEQAMKLGAHDFVATGEDKTWYKNYDDHFDFILNCASGIDGLNLSEYLSTLKVDKKFVSVG-LPPSEDKFEVSPFTFLQQGASFGSSLLGSKTEVKEMLNLAAKHNVRPMIEEVPISEENCAKALDRCHAGDVRYRFV--FTDFDKAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252920 for 3022 contacts (-83.7/contact) +
2D Compatibility (PS) -36956 + (NN) -12523 + (LL) 1068
1D Compatibility (HY) -26400 + (ID) 6950
Total energy: -334681.0 ( -110.75 by residue)
QMean score : 0.448
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