Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNAFSLAPLFRHSVGFDRFNDLFESALRNEAGSTYPPYNVEKHGDDEYRIVIAAAGFQEEDLDLQVERGVLTVSGGKREKSTDNVTYLHQGIAQRAFKLSFRLADHIEVK--AASL-ANGLLNIDLVRLVPE---EAKPKRIAINGQRPALDNQ
3L1E Chain:A ((2-105))
-----------------------------------SGISEVRSDR-DKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHN-ERQDDHGY-----ISREFHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS---------
General information:
TITO was launched using:
RESULT:
Template:
3L1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51914 for 542 contacts (-95.8/contact) +
2D Compatibility (PS) -10176 + (NN) 607 + (LL) 2520
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -66413.0 ( -122.53 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_3L1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L1E-query.scw
PDB file :
Tito_Scwrl_3L1E.pdb
: