Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
4HMT Chain:B ((19-225))
-------SESLTGTLDAPFPEYQTLPADPMSVLHNWLERARRVGIREPRALALATADSQGRPSTRIVVISEISDAGVVFSTHAGSQKGRELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSDTGWNVRRLQP
General information:
TITO was launched using:
RESULT:
Template:
4HMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56298 for 1481 contacts (-38.0/contact) +
2D Compatibility (PS) -22517 + (NN) -15105 + (LL) 416
1D Compatibility (HY) -20000 + (ID) 7600
Total energy: -121104.0 ( -81.77 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4HMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HMT-query.scw
PDB file :
Tito_Scwrl_4HMT.pdb
: