Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
1MWC Chain:B ((1-153))
-GLSDGEWQLVLNVWGKVEADVAGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGNTVLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDMAAKYKELGFQG
General information:
TITO was launched using:
RESULT:
Template:
1MWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64634 for 1140 contacts (-56.7/contact) +
2D Compatibility (PS) -16434 + (NN) -10609 + (LL) 208
1D Compatibility (HY) -18000 + (ID) 7150
Total energy: -116619.0 ( -102.30 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1MWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MWC-query.scw
PDB file :
Tito_Scwrl_1MWC.pdb
: