Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPPAEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1EJH Chain:C ((4-190))
------------------------------PEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTAT------KNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1EJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86152 for 1395 contacts (-61.8/contact) +
2D Compatibility (PS) -19449 + (NN) -10762 + (LL) 1028
1D Compatibility (HY) -26400 + (ID) 9050
Total energy: -150785.0 ( -108.09 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_1EJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJH-query.scw
PDB file :
Tito_Scwrl_1EJH.pdb
: