Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAASGEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYLPQKTASSSHPSA
4FYI Chain:B ((4-143))
----------SVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVAD-----------GGDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAY-------------
General information:
TITO was launched using:
RESULT:
Template:
4FYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97476 for 1001 contacts (-97.4/contact) +
2D Compatibility (PS) -14345 + (NN) -9382 + (LL) 1820
1D Compatibility (HY) -19200 + (ID) 6400
Total energy: -144983.0 ( -144.84 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_4FYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FYI-query.scw
PDB file :
Tito_Scwrl_4FYI.pdb
: