Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSVREPQ
1E3V Chain:A ((2-129))
-NLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSVRE--
General information:
TITO was launched using:
RESULT:
Template:
1E3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74522 for 931 contacts (-80.0/contact) +
2D Compatibility (PS) -14134 + (NN) -4694 + (LL) 188
1D Compatibility (HY) -18400 + (ID) 6400
Total energy: -117962.0 ( -126.70 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1E3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E3V-query.scw
PDB file :
Tito_Scwrl_1E3V.pdb
: